public class Owczarzy11TandemLockedAcid extends LockedAcidNNMethod implements NamedMethod
Modifier and Type | Field and Description |
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static java.lang.String |
defaultFileName
String defaultFileName : default name for the xml file containing the thermodynamic parameters for locked nucleic acid
|
collector, fileName
Constructor and Description |
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Owczarzy11TandemLockedAcid() |
Modifier and Type | Method and Description |
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java.lang.String |
getName()
Gets the full name of the method.
|
void |
initialiseFileName(java.lang.String methodName)
If a file name is entered by the user, the file name of the model becomes the file name entered by the user,
otherwise the default file name of the model is used.
|
void |
loadData(java.util.HashMap<java.lang.String,java.lang.String> options)
To load the necessary thermodynamic parameters of the implemented class.
|
computeThermodynamics, isApplicable, isMissingParameters
getCollector, getData, getDataFileName, loadFile
public static java.lang.String defaultFileName
public void initialiseFileName(java.lang.String methodName)
PatternComputationMethod
initialiseFileName
in interface PatternComputationMethod
initialiseFileName
in class PatternComputation
methodName
- : method or model name entered by the user.public void loadData(java.util.HashMap<java.lang.String,java.lang.String> options)
PatternComputationMethod
loadData
in interface PatternComputationMethod
loadData
in class PatternComputation
options
- which contains the current options. (default options and options entered by the user)public java.lang.String getName()
getName
in interface NamedMethod
getName
in class LockedAcidNNMethod