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O

OligomerConcentrationDialog - Class in meltinggui.dialogs
A dialog for specifying the oligomer concentration.
OligomerConcentrationDialog() - Constructor for class meltinggui.dialogs.OligomerConcentrationDialog
Sets up the dialog.
OptionManagement - Class in melting.configuration
This class contains all the methods necessary to manage the options entered by the user.
OptionManagement() - Constructor for class melting.configuration.OptionManagement
creates an OptionManagement object.
OptionSyntaxError - Exception in melting.exceptions
This class represents an exception raised by an option syntax error.
OptionSyntaxError() - Constructor for exception melting.exceptions.OptionSyntaxError
 
OptionSyntaxError(String, Throwable) - Constructor for exception melting.exceptions.OptionSyntaxError
 
OptionSyntaxError(Throwable) - Constructor for exception melting.exceptions.OptionSyntaxError
 
OptionSyntaxError(String) - Constructor for exception melting.exceptions.OptionSyntaxError
 
OuterFrame - Class in meltinggui.frames
 
OuterFrame() - Constructor for class meltinggui.frames.OuterFrame
Sets up the GUI and displays the main MELTING frame.
OutputField - Class in meltinggui.widgets
A label together with a non-editable text box for displaying results.
OutputField(String) - Constructor for class meltinggui.widgets.OutputField
Creates and sets up the field.
outPutFile - Static variable in class melting.configuration.OptionManagement
Option name to print the melting results in an output file.
Owczarzy04SodiumCorrection19 - Class in melting.ionCorrection.sodiumCorrections
This class represents the sodium correction model owc1904.
Owczarzy04SodiumCorrection19() - Constructor for class melting.ionCorrection.sodiumCorrections.Owczarzy04SodiumCorrection19
 
Owczarzy04SodiumCorrection20 - Class in melting.ionCorrection.sodiumCorrections
This class represents the sodium correction model owc2004.
Owczarzy04SodiumCorrection20() - Constructor for class melting.ionCorrection.sodiumCorrections.Owczarzy04SodiumCorrection20
 
Owczarzy04SodiumCorrection21 - Class in melting.ionCorrection.sodiumCorrections
This class represents the sodium correction model owc2104.
Owczarzy04SodiumCorrection21() - Constructor for class melting.ionCorrection.sodiumCorrections.Owczarzy04SodiumCorrection21
 
Owczarzy04SodiumCorrection22 - Class in melting.ionCorrection.sodiumCorrections
This class represents the sodium correction model owc2204.
Owczarzy04SodiumCorrection22() - Constructor for class melting.ionCorrection.sodiumCorrections.Owczarzy04SodiumCorrection22
 
Owczarzy08MagnesiumCorrection - Class in melting.ionCorrection.magnesiumCorrections
This class represents the magnesium correction model owc08.
Owczarzy08MagnesiumCorrection() - Constructor for class melting.ionCorrection.magnesiumCorrections.Owczarzy08MagnesiumCorrection
 
Owczarzy08MixedNaMgCorrection - Class in melting.ionCorrection.mixedNaMgCorrections
This class represents the mixed (Na,Mg) correction model owcmix08.
Owczarzy08MixedNaMgCorrection() - Constructor for class melting.ionCorrection.mixedNaMgCorrections.Owczarzy08MixedNaMgCorrection
 
Owczarzy11LockedAcid - Class in melting.patternModels.specificAcids
This class represents the locked nucleic acid (AL, GL, CL or TL) model owc11.
Owczarzy11LockedAcid() - Constructor for class melting.patternModels.specificAcids.Owczarzy11LockedAcid
 
Owczarzy11SingleMismatchLockedAcid - Class in melting.patternModels.specificAcids
This class represents the locked nucleic acid (AL, GL, CL or TL) model owc11.
Owczarzy11SingleMismatchLockedAcid() - Constructor for class melting.patternModels.specificAcids.Owczarzy11SingleMismatchLockedAcid
 
Owczarzy11TandemLockedAcid - Class in melting.patternModels.specificAcids
This class represents the locked nucleic acid (AL, GL, CL or TL) model owc11.
Owczarzy11TandemLockedAcid() - Constructor for class melting.patternModels.specificAcids.Owczarzy11TandemLockedAcid
 
Owen69 - Class in melting.approximativeMethods
This class represents the model owe69.
Owen69() - Constructor for class melting.approximativeMethods.Owen69
 
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